Wing-Kin Sung (2009) Algorithms in bioinformatics: A practical introduction. Chapman & Hall/CRC. ISBN: 978-1-4200-7033-0. Chapters 1-7, and 10. The book's home page.
The following sections of the book is not part of the syllabus: 1.5, 1.7.1-1.7.6, 1.8, 2.5.3, 5.6-5.9, 6.5, 7.2.2, 7.3.3, 8, 9, 10.9, 10.11, 11, 12, 13.
Material available on Fronter: all lecture presentations, all exercises and all partial exams.